If there are aggregate data rather than individual data, analysis in SAS is less intuitive compared to STATA.
/* the aim of this analysis is to assess if the proportion of infection is changing across different years */
data xtrct;
input yr inf mech upgr other;/*infection has number of infection patients */
cards;
2000 12 7 0 40
2001 10 7 1 52
2002 34 13 4 24
2003 30 27 6 21
;
/* We need to convert this wide data set into long dataset*/
data trite;
set xtrct;
ninf=mech+upgr+other; /*total number of non infection patients */
ARRAY a(1:2) inf ninf;
DO t = 1 to 2 ;
num= a(t) ;
indicinf=t; /*indicator if num represents infections or non infections */
OUTPUT ;
END ;
proc print;
run;
/* The data table should be as follows. Note num corresponds to number of cases with infection and without infection.*/
Obs | yr | inf | mech | upgr | other | ninf | inf | infi | num |
1 | 2000 | 12 | 7 | 0 | 40 | 47 | 12 | 1 | 12 |
2 | 2000 | 12 | 7 | 0 | 40 | 47 | 12 | 2 | 47 |
3 | 2001 | 10 | 7 | 1 | 52 | 60 | 10 | 1 | 10 |
4 | 2001 | 10 | 7 | 1 | 52 | 60 | 10 | 2 | 60 |
5 | 2002 | 34 | 13 | 4 | 24 | 41 | 34 | 1 | 34 |
6 | 2002 | 34 | 13 | 4 | 24 | 41 | 34 | 2 | 41 |
7 | 2003 | 30 | 27 | 6 | 21 | 54 | 30 | 1 | 30 |
8 | 2003 | 30 | 27 | 6 | 21 | 54 | 30 | 2 | 54 |
/* To assess the proportion of patients with infections is same over the 3 year period */
title3 '(Two one-way tables followed by a 2x2 table)';
table yr*indicinf / chisq;
weight num;
run;
******************************************************************************
The output is here.
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